Safe Haskell | Safe-Infered |
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Main
Description
Flx is a simple tool to trim 454 Titanium reads down to FLX size, i.e. from 800 flows to 400 flows. This is sometimes useful to investigate the relatvie benefit of Titanium's longer read lengths, and will also serve as a (rather crude) way to improve average sequence quality.
We're using trimFromTo
, which clips a ReadBlock
down to specific
base positions, and we use flowToBasePos
to find the base corresponding
to flow number 400.