org.biojava.utils.automata
Class NfaSubModel
java.lang.Object
org.biojava.utils.automata.NfaSubModel
- All Implemented Interfaces:
- NfaBuilder
public class NfaSubModel
- extends java.lang.Object
- implements NfaBuilder
This class caches a reference to all objects that
it directs its delegate to make. These references
make it relatively easy for it to duplicate
all objects made through this class.
Method Summary |
org.biojava.utils.automata.FiniteAutomaton.Transition |
addEpsilonTransition(org.biojava.utils.automata.FiniteAutomaton.Node start,
org.biojava.utils.automata.FiniteAutomaton.Node end)
|
org.biojava.utils.automata.FiniteAutomaton.Transition |
addLambdaTransition(org.biojava.utils.automata.FiniteAutomaton.Node start,
org.biojava.utils.automata.FiniteAutomaton.Node end)
|
org.biojava.utils.automata.FiniteAutomaton.Node |
addNode(boolean isTerminal)
|
org.biojava.utils.automata.FiniteAutomaton.Transition |
addTransition(org.biojava.utils.automata.FiniteAutomaton.Node start,
org.biojava.utils.automata.FiniteAutomaton.Node end,
Symbol sym)
|
void |
append(NfaSubModel submodel)
|
org.biojava.utils.automata.FiniteAutomaton.NodeSet |
createNodeSet()
|
NfaSubModel |
duplicate()
Makes a deep clone of this instance. |
FiniteAutomaton |
getAutomaton()
|
org.biojava.utils.automata.FiniteAutomaton.Node |
getEnd()
|
org.biojava.utils.automata.FiniteAutomaton.NodeSet |
getNodes()
|
org.biojava.utils.automata.FiniteAutomaton.Node |
getStart()
|
java.util.Set |
getTransitions()
|
java.lang.String |
toString()
|
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait |
getAutomaton
public FiniteAutomaton getAutomaton()
- Specified by:
getAutomaton
in interface NfaBuilder
getStart
public org.biojava.utils.automata.FiniteAutomaton.Node getStart()
- Specified by:
getStart
in interface NfaBuilder
getEnd
public org.biojava.utils.automata.FiniteAutomaton.Node getEnd()
- Specified by:
getEnd
in interface NfaBuilder
addNode
public org.biojava.utils.automata.FiniteAutomaton.Node addNode(boolean isTerminal)
- Specified by:
addNode
in interface NfaBuilder
addTransition
public org.biojava.utils.automata.FiniteAutomaton.Transition addTransition(org.biojava.utils.automata.FiniteAutomaton.Node start,
org.biojava.utils.automata.FiniteAutomaton.Node end,
Symbol sym)
- Specified by:
addTransition
in interface NfaBuilder
addEpsilonTransition
public org.biojava.utils.automata.FiniteAutomaton.Transition addEpsilonTransition(org.biojava.utils.automata.FiniteAutomaton.Node start,
org.biojava.utils.automata.FiniteAutomaton.Node end)
- Specified by:
addEpsilonTransition
in interface NfaBuilder
addLambdaTransition
public org.biojava.utils.automata.FiniteAutomaton.Transition addLambdaTransition(org.biojava.utils.automata.FiniteAutomaton.Node start,
org.biojava.utils.automata.FiniteAutomaton.Node end)
- Specified by:
addLambdaTransition
in interface NfaBuilder
getNodes
public org.biojava.utils.automata.FiniteAutomaton.NodeSet getNodes()
- Specified by:
getNodes
in interface NfaBuilder
getTransitions
public java.util.Set getTransitions()
- Specified by:
getTransitions
in interface NfaBuilder
createNodeSet
public org.biojava.utils.automata.FiniteAutomaton.NodeSet createNodeSet()
- Specified by:
createNodeSet
in interface NfaBuilder
duplicate
public NfaSubModel duplicate()
- Makes a deep clone of this instance.
append
public void append(NfaSubModel submodel)
toString
public java.lang.String toString()
- Specified by:
toString
in interface NfaBuilder
- Overrides:
toString
in class java.lang.Object