org.biojava.ontology.io
Class GOParser

java.lang.Object
  extended by org.biojava.ontology.io.GOParser

public class GOParser
extends java.lang.Object

Simple parser for the Gene Ontology (GO) flatfile format.

Since:
1.4
Author:
Thomas Down

Constructor Summary
GOParser()
           
 
Method Summary
 Ontology parseGO(java.io.BufferedReader goFile, java.lang.String ontoName, java.lang.String ontoDescription, OntologyFactory factory)
           
 
Methods inherited from class java.lang.Object
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait
 

Constructor Detail

GOParser

public GOParser()
Method Detail

parseGO

public Ontology parseGO(java.io.BufferedReader goFile,
                        java.lang.String ontoName,
                        java.lang.String ontoDescription,
                        OntologyFactory factory)
                 throws ParseException,
                        java.io.IOException
Throws:
ParseException
java.io.IOException