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public interface OrthoPair
Each HomologeneEntry represents a single Homologene record that relates two presumptive orthologues.
Method Summary | |
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Orthologue |
getFirstOrthologue()
gets the first orthologue in the orthology relationship. |
double |
getPercentIdentity()
get percentage identity. |
String |
getRef()
get reference to evidence for orthology. |
Orthologue |
getSecondOrthologue()
gets the first orthologue in the orthology relationship. |
SimilarityType |
getSimilarity()
gets the second orthologue in the orthology relationship. |
Method Detail |
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Orthologue getFirstOrthologue()
I agree that this access route is somewhat sucky for a symmetric relationship but I'd hate returning a Set of orthologues more and all the fiddling would require.
Orthologue getSecondOrthologue()
SimilarityType getSimilarity()
double getPercentIdentity()
String getRef()
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