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public interface SequenceIterator
An iterator over a bag of sequences.
java.util.Iterator was not appropriate here, as we need specific exceptions to be thrown, and as much type-safety as possible. However, we have made it as compliant with Iterator as we could so that there is a minimal learning curve.
RichSequenceIterator
Method Summary | |
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boolean |
hasNext()
Returns whether there are more sequences to iterate over. |
Sequence |
nextSequence()
Returns the next sequence in the iterator. |
Method Detail |
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boolean hasNext()
Sequence nextSequence() throws NoSuchElementException, BioException
NoSuchElementException
- if you call nextSequence when hasNext
returns false
BioException
- if for any reason the sequence could not be retrieved
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