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Packages that use BackPointer | |
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org.biojava.bio.dp | HMM and Dynamic Programming Algorithms. |
org.biojava.bio.dp.twohead |
Uses of BackPointer in org.biojava.bio.dp |
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Fields in org.biojava.bio.dp declared as BackPointer | |
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BackPointer |
BackPointer.back
The previous backpointer (towards origin of DP matrix) in traceback. |
Constructors in org.biojava.bio.dp with parameters of type BackPointer | |
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BackPointer(State state,
BackPointer back,
double score)
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Uses of BackPointer in org.biojava.bio.dp.twohead |
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Fields in org.biojava.bio.dp.twohead declared as BackPointer | |
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BackPointer[] |
Cell.backPointers
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protected BackPointer[][][] |
LightPairDPCursor.bPointers
Description of the Field |
protected BackPointer[][][] |
AbstractMatrixPairDPCursor.bPointers
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protected BackPointer[] |
LightPairDPCursor.emptyBP
Description of the Field |
protected BackPointer[] |
AbstractMatrixPairDPCursor.emptyBP
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Methods in org.biojava.bio.dp.twohead with parameters of type BackPointer | |
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CellCalculator |
DPInterpreter.viterbi(ScoreType scoreType,
BackPointer terminal)
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CellCalculator |
CellCalculatorFactory.viterbi(ScoreType scoreType,
BackPointer terminal)
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