Uses of Interface
org.biojava.bio.symbol.AlphabetIndex

Packages that use AlphabetIndex
org.biojava.bio.dist Probability distributions over Alphabets. 
org.biojava.bio.symbol Representation of the Symbols that make up a sequence, and locations within them. 
 

Uses of AlphabetIndex in org.biojava.bio.dist
 

Constructors in org.biojava.bio.dist with parameters of type AlphabetIndex
IndexedCount(AlphabetIndex indexer)
          Get a new InexedCount for an alphabet indexer.
 

Uses of AlphabetIndex in org.biojava.bio.symbol
 

Methods in org.biojava.bio.symbol that return AlphabetIndex
static AlphabetIndex AlphabetManager.getAlphabetIndex(FiniteAlphabet alpha)
          Get an indexer for a specified alphabet.
static AlphabetIndex AlphabetManager.getAlphabetIndex(Symbol[] syms)
          Get an indexer for an array of symbols.