Class Bio::KEGG::KGML::Relation
In: lib/bio/db/kegg/kgml.rb
Parent: Object

Bio::KEGG::KGML::Relation contains a relation element in the KGML.

Methods

edge  

External Aliases

entry1 -> node1
entry1= -> node1=
entry2 -> node2
entry2= -> node2=
type -> rel
type= -> rel=

Attributes

entry1  [RW]  the first entry of the relation (Integer or nil) (‘entry1’ attribute in ‘relation’ element)
entry2  [RW]  the second entry of the relation (Integer or nil) (‘entry2’ attribute in ‘relation’ element)
name  [RW]  interaction and/or relation type (String or nil). See www.genome.jp/kegg/xml/docs/ for details. (‘name’ attribute in ‘subtype’ element)
type  [RW]  type of this relation (String or nil). Normally one of the following:
  • "ECrel"
  • "PPrel"
  • "GErel"
  • "PCrel"
  • "maplink"

(‘type’ attribute in ‘relation’ element)

value  [RW]  interaction and/or relation information (String or nil). See www.genome.jp/kegg/xml/docs/ for details. (‘value’ attribute in ‘subtype’ element)

Public Instance methods

(Deprecated?)

[Source]

     # File lib/bio/db/kegg/kgml.rb, line 465
465:     def edge
466:       @value.to_i
467:     end

[Validate]