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Class Summary | |
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FetchSeq | Fetch sequences by accession from the NCBI efetch server and dump them as genbank. |
GCContent | Counts the GC content of a sequence in fasta format |
MotifFinder2 | Modified version of MotifFinder.java This program will search a fasta file for a motif. |
ReverseComplement | Demo of reverse complementing a fasta DNA file |
SimpleAssemblyTest | |
TestEmbl | Demo reading an EMBL file |
TestEmbl2 | Another EMBL demo |
TestGenbank | Demo GenBank reading |
TestRefSeqPrt | Demo of reading RefSeqProtein |
TestSubSequence | Demo the use of SubSequence |
TestSwissprot | SwissProt format has been replaced by Uniprot format. |
TestTranslation | |
UniProtDemo |
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