Uses of Class
org.biojava.utils.ParseErrorEvent

Packages that use ParseErrorEvent
org.biojava.bio.program.phred Parser for Phred output 
org.biojava.bio.seq.io Classes and interfaces for processing and producing flat-file representations of sequences. 
org.biojava.utils Miscellaneous utility classes used by other BioJava components. 
 

Uses of ParseErrorEvent in org.biojava.bio.program.phred
 

Methods in org.biojava.bio.program.phred with parameters of type ParseErrorEvent
 void PhredFormat.BadLineParsed(ParseErrorEvent theEvent)
          This method determines the behaviour when a bad line is processed.
protected  void PhredFormat.notifyParseErrorEvent(ParseErrorEvent theEvent)
          Passes the event on to all the listeners registered for ParseErrorEvents.
 

Uses of ParseErrorEvent in org.biojava.bio.seq.io
 

Methods in org.biojava.bio.seq.io with parameters of type ParseErrorEvent
 void StreamReader.BadLineParsed(ParseErrorEvent theEvent)
          This method determines the behaviour when a bad line is processed.
 void GenbankFormat.BadLineParsed(ParseErrorEvent theEvent)
          Deprecated. This method determines the behaviour when a bad line is processed.
 void FastaFormat.BadLineParsed(ParseErrorEvent theEvent)
          Deprecated. This method determines the behaviour when a bad line is processed.
 void EmblLikeFormat.BadLineParsed(ParseErrorEvent theEvent)
          Deprecated.  This method determines the behaviour when a bad line is processed.
protected  void SwissprotProcessor.notifyParseErrorEvent(ParseErrorEvent theEvent)
          Deprecated. Passes the event on to all the listeners registered for ParseErrorEvents.
protected  void GenbankProcessor.notifyParseErrorEvent(ParseErrorEvent theEvent)
          Deprecated. Passes the event on to all the listeners registered for ParseErrorEvents.
protected  void GenbankFormat.notifyParseErrorEvent(ParseErrorEvent theEvent)
          Deprecated. Passes the event on to all the listeners registered for ParseErrorEvents.
protected  void FastaFormat.notifyParseErrorEvent(ParseErrorEvent theEvent)
          Deprecated. Passes the event on to all the listeners registered for ParseErrorEvents.
protected  void EmblProcessor.notifyParseErrorEvent(ParseErrorEvent theEvent)
          Deprecated. Passes the event on to all the listeners registered for ParseErrorEvents.
protected  void EmblLikeFormat.notifyParseErrorEvent(ParseErrorEvent theEvent)
          Deprecated. Passes the event on to all the listeners registered for ParseErrorEvents.
 

Uses of ParseErrorEvent in org.biojava.utils
 

Methods in org.biojava.utils with parameters of type ParseErrorEvent
 void ParseErrorListener.BadLineParsed(ParseErrorEvent theEvent)
          Method called when the parser encounters a bad line.