org.biojava.bio.dp
Class ScoreType.Odds
java.lang.Object
org.biojava.bio.dp.ScoreType.Odds
- All Implemented Interfaces:
- Serializable, ScoreType
- Enclosing interface:
- ScoreType
public static class ScoreType.Odds
- extends Object
- implements ScoreType, Serializable
In this class, calculateScore returns the odds ratio
of a symbol being emitted. That is, the ratio of the
probability of a Symbol being emitted to it being
emitted by the null model.
- Author:
- Matthew Pocock
- See Also:
- Serialized Form
Methods inherited from class java.lang.Object |
clone, equals, finalize, getClass, hashCode, notify, notifyAll, toString, wait, wait, wait |
ScoreType.Odds
public ScoreType.Odds()
calculateScore
public double calculateScore(Distribution dist,
Symbol sym)
throws IllegalSymbolException
- Description copied from interface:
ScoreType
- Calculates the score associated with a distribution and a symbol.
- Specified by:
calculateScore
in interface ScoreType
- Throws:
IllegalSymbolException