Having regular backups is a godsend for security matters. If your system is compromised, you can restore the data you need from backups. Of course, some data is valuable to the attacker too, and they will not only destroy it, they will steal it and have their own copies; but at least you will still have the data.
You should check several backups back into the past before restoring a file that has been tampered with. The intruder could have compromised your files long ago, and you could have made many successful backups of the compromised file!!!
Of course, there are also a raft of security concerns with backups. Make sure you are storing them in a secure place. Know who has access to them. (If an attacker can get your backups, they can have access to all your data without you ever knowing it.)