BugSeeker allows you to custom configure the color settings for many different elements include all syntax highlighting elements and the coloring used by the Console for the various types of output that is displayed to the console.
Configuring colors
To configure the color of a element select the item from the Display items list and then select the foreground and/or background color for that element by choose a predefined color from the drop down combo or my pressing the More colors button and then specifying precisely the color you want to use.
If you select the special no color option (the hollow box icon with an x crossed over it), this means no color is specified and BugSeeker is to use the default color for that element.
Also, some elements may ignore the foreground or background color you specify because it only needs one of the colors to draw itself.