As well as the base libraries and standard EMBOSS distribution, various extra packages (EMBASSY) are distributed with EMBOSS.
To install an EMBASSY package, go to the relevant directory. For example to install PHYLIP (which was unpacked into /packages/EMBOSS-1.0.0/embassy/PHYLIP-3.573c earlier) go to the relevant directory.
% cd /packages/EMBOSS-1.0.0/embassy/PHYLIP-3.573c % ./configure --prefix=/site/prog/emboss ... output not shown % make ... output not shown % make install ... output not shown
Note. You MUST use the same arguments for configure that you used for the installation of the main EMBOSS package.
Repeat as neccessary for the other EMBASSY packages.
You should now find that running WOSSNAME as before lists the EMBASSY programs.