org.biojava.bio.dp
Interface DPMatrix

All Known Implementing Classes:
PairDPMatrix, SingleDPMatrix

public interface DPMatrix

Author:
Matthew Pocock

Method Summary
 double getCell(int[] index)
           
 double getScore()
           
 MarkovModel model()
           
 State[] states()
           
 SymbolList[] symList()
           
 

Method Detail

states

public State[] states()

model

public MarkovModel model()

symList

public SymbolList[] symList()

getScore

public double getScore()

getCell

public double getCell(int[] index)
               throws java.lang.IndexOutOfBoundsException
Throws:
java.lang.IndexOutOfBoundsException