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Packages that use TagValueListener | |
org.biojava.bio.program.tagvalue | Process files as streams of records, each with tags with values. |
org.biojava.bio.program.unigene | Objects for representing Unigene clusters. |
Uses of TagValueListener in org.biojava.bio.program.tagvalue |
Classes in org.biojava.bio.program.tagvalue that implement TagValueListener | |
class |
AnnotationBuilder
Builds an Annotation tree from TagValue events using an AnnotationType to work out which fields are of what type. |
class |
Echo
A simple listener that just echoes events back to the console. |
class |
Indexer
Listens to tag-value events and passes on indexing events to an IndexStore. |
class |
Indexer2
Listens to tag-value events and passes on indexing events to an IndexStore. |
class |
RegexFieldFinder
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class |
TagDelegator
Pushes a new parser and listener, or delegate to a listener depending on the tag. |
class |
TagDropper
Silently drop all tags except those specified, and pass the rest onto a delegate. |
class |
TagRenamer
Rename tags using a TagMapper. |
class |
TagValueWrapper
Helper class to wrap one TagValueListener inside another one. |
class |
ValueChanger
Intercept the values associated with some tags and change them systematically. |
Methods in org.biojava.bio.program.tagvalue that return TagValueListener | |
TagValueListener |
TagDelegator.getListener(java.lang.Object tag)
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TagValueListener |
ParserListener.getListener()
getListener returns the listener of the pair. |
TagValueListener |
TagValueWrapper.getDelegate()
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Methods in org.biojava.bio.program.tagvalue with parameters of type TagValueListener | |
static ParserListener |
Formats.createEmblParserListener(TagValueListener listener)
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static ParserListener |
Formats.createSwissprotParserListener(TagValueListener listener)
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boolean |
Parser.read(java.io.BufferedReader reader,
TagValueParser parser,
TagValueListener listener)
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void |
TagDelegator.setParserListener(java.lang.Object tag,
TagValueParser parser,
TagValueListener listener)
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void |
TagDelegator.setListener(java.lang.Object tag,
TagValueListener listener)
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void |
TagValueWrapper.setDelegate(TagValueListener delegate)
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void |
TagValueContext.pushParser(TagValueParser subParser,
TagValueListener subListener)
Push a parser and listener pair onto the parser stack. |
Constructors in org.biojava.bio.program.tagvalue with parameters of type TagValueListener | |
RegexFieldFinder(TagValueListener delegate,
java.util.regex.Pattern pattern,
java.lang.String[] tags,
boolean inLine)
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TagRenamer(TagValueListener delegate,
TagMapper mapper)
Build a new TagRenamer with a delegate and mapper. |
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ValueChanger(TagValueListener delegate)
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ValueChanger(TagValueListener delegate,
ChangeTable changeTable)
Create a new changer that will pass the modified event stream to a delegate. |
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TagDelegator(TagValueListener delegate)
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ParserListener(TagValueParser parser,
TagValueListener listener)
Creates a new ParserListener instance. |
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TagDropper(TagValueListener tvl)
Create a new TagDropper that will pass on all retained tags and values to tvl. |
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TagValueWrapper(TagValueListener delegate)
Build a TagValueWrapper that will forward everything to a delegate. |
Uses of TagValueListener in org.biojava.bio.program.unigene |
Methods in org.biojava.bio.program.unigene with parameters of type TagValueListener | |
static ParserListener |
UnigeneTools.buildDataParser(TagValueListener listener)
Generate a tag-value parser for unigene data files that will pass all parsing events on to your listener. |
static ParserListener |
UnigeneTools.buildLibInfoParser(TagValueListener listener)
Generate a tag-value parser for the library info unigene files. |
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