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Packages that use ChangeSupport | |
org.biojava.bio | The core classes that will be used throughout the bio packages. |
org.biojava.bio.dist | Probability distributions over Alphabets. |
org.biojava.bio.dp | HMM and Dynamic Programming Algorithms. |
org.biojava.bio.gui.sequence | Graphical displays of biological sequences and associated annotations. |
org.biojava.bio.program.das | Development client for the Distributed Annotation System. |
org.biojava.bio.search | Interfaces and classes for representing sequence similarity search results. |
org.biojava.bio.seq | Classes and interfaces for defining biological sequences and informatics objects. |
org.biojava.bio.seq.db | Collections of biological sequence data. |
org.biojava.bio.seq.distributed | Sequences and SequenceDBs which are composed from data taken from a number of data sources. |
org.biojava.bio.seq.impl | Standard in-memory implementations of Sequence and
Feature . |
org.biojava.bio.symbol | Representation of the Symbols that make up a sequence, and locations within them. |
org.biojava.bio.taxa | Taxonomy object for representing species information. |
org.biojava.utils | Miscellaneous utility classes used by other BioJava components. |
Uses of ChangeSupport in org.biojava.bio |
Methods in org.biojava.bio that return ChangeSupport | |
protected ChangeSupport |
OverlayAnnotation.getChangeSupport(ChangeType changeType)
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protected ChangeSupport |
MergeAnnotation.getChangeSupport(ChangeType changeType)
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Constructors in org.biojava.bio with parameters of type ChangeSupport | |
OverlayAnnotation.PropertyForwarder(java.lang.Object source,
ChangeSupport cs)
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MergeAnnotation.PropertyForwarder(java.lang.Object source,
ChangeSupport cs)
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Annotatable.AnnotationForwarder(java.lang.Object source,
ChangeSupport cs)
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Uses of ChangeSupport in org.biojava.bio.dist |
Methods in org.biojava.bio.dist that return ChangeSupport | |
protected ChangeSupport |
TranslatedDistribution.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
AbstractOrderNDistribution.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
AbstractDistribution.getChangeSupport(ChangeType ct)
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Constructors in org.biojava.bio.dist with parameters of type ChangeSupport | |
Distribution.NullModelForwarder(java.lang.Object source,
ChangeSupport cs)
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Uses of ChangeSupport in org.biojava.bio.dp |
Methods in org.biojava.bio.dp that return ChangeSupport | |
protected ChangeSupport |
SimpleEmissionState.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
SimpleMarkovModel.getChangeSupport(ChangeType ct)
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Constructors in org.biojava.bio.dp with parameters of type ChangeSupport | |
MarkovModel.DistributionForwarder(java.lang.Object source,
ChangeSupport cs)
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Uses of ChangeSupport in org.biojava.bio.gui.sequence |
Methods in org.biojava.bio.gui.sequence that return ChangeSupport | |
protected ChangeSupport |
PairwiseOverlayRenderer.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
FeatureBlockSequenceRenderer.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
FilteringRenderer.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
TranslatedSequencePanel.getChangeSupport(ChangeType ct)
getChangeSupport lazily instantiates a helper for
change listeners. |
protected ChangeSupport |
SequencePanel.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
PairwiseFilteringRenderer.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
SequenceRendererWrapper.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
BumpedRenderer.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
PairwiseSequencePanel.getChangeSupport(ChangeType ct)
getChangeSupport lazily instantiates a helper for
change listeners. |
protected ChangeSupport |
PaddingRenderer.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
OverlayRendererWrapper.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
SequencePoster.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
LabelledSequenceRenderer.generateChangeSupport()
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protected ChangeSupport |
MultiLineRenderer.getChangeSupport(ChangeType ct)
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Constructors in org.biojava.bio.gui.sequence with parameters of type ChangeSupport | |
PairwiseSequenceRenderer.PairwiseRendererForwarder(PairwiseSequenceRenderer source,
ChangeSupport cs)
Creates a new PairwiseRendererForwarder . |
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SequenceRenderer.RendererForwarder(SequenceRenderer source,
ChangeSupport cs)
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Uses of ChangeSupport in org.biojava.bio.program.das |
Methods in org.biojava.bio.program.das that return ChangeSupport | |
protected ChangeSupport |
DASSequence.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
ReferenceServer.getChangeSupport(ChangeType ct)
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Uses of ChangeSupport in org.biojava.bio.search |
Methods in org.biojava.bio.search that return ChangeSupport | |
protected ChangeSupport |
SequenceDBSearchHit.getChangeSupport(ChangeType ct)
Deprecated. |
protected ChangeSupport |
SimpleSeqSimilaritySearchSubHit.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
SimpleSeqSimilaritySearchHit.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
SequenceDBSearchSubHit.getChangeSupport(ChangeType ct)
Deprecated. |
protected ChangeSupport |
SimpleSeqSimilaritySearchResult.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
SequenceDBSearchResult.getChangeSupport(ChangeType ct)
Deprecated. |
Uses of ChangeSupport in org.biojava.bio.seq |
Methods in org.biojava.bio.seq that return ChangeSupport | |
protected ChangeSupport |
FeatureTypes.RepositoryImpl.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
SimpleAssembly.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
LazyFeatureHolder.getChangeSupport(ChangeType ct)
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Uses of ChangeSupport in org.biojava.bio.seq.db |
Methods in org.biojava.bio.seq.db that return ChangeSupport | |
protected ChangeSupport |
SequenceDBWrapper.getChangeSupport(ChangeType ct)
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Constructors in org.biojava.bio.seq.db with parameters of type ChangeSupport | |
SequenceDBWrapper.SequencesForwarder(java.lang.Object source,
ChangeSupport cs)
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Uses of ChangeSupport in org.biojava.bio.seq.distributed |
Methods in org.biojava.bio.seq.distributed that return ChangeSupport | |
protected ChangeSupport |
DistributedSequenceDB.getChangeSupport()
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Uses of ChangeSupport in org.biojava.bio.seq.impl |
Methods in org.biojava.bio.seq.impl that return ChangeSupport | |
protected ChangeSupport |
SimpleSequence.getChangeSupport(ChangeType ct)
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protected ChangeSupport |
LazyFilterFeatureHolder.getChangeSupport()
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protected ChangeSupport |
SimpleFeature.getChangeSupport(ChangeType ct)
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Uses of ChangeSupport in org.biojava.bio.symbol |
Methods in org.biojava.bio.symbol that return ChangeSupport | |
protected ChangeSupport |
AbstractSymbol.getChangeSupport(ChangeType changeType)
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protected ChangeSupport |
SimpleAlphabet.getChangeSupport(ChangeType ct)
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Constructors in org.biojava.bio.symbol with parameters of type ChangeSupport | |
AbstractSymbolList.EditScreener(java.lang.Object source,
ChangeSupport cs,
int min,
int max)
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AbstractSymbolList.EditTranslater(java.lang.Object source,
ChangeSupport cs,
int min,
int max)
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Uses of ChangeSupport in org.biojava.bio.taxa |
Methods in org.biojava.bio.taxa that return ChangeSupport | |
protected ChangeSupport |
AbstractTaxon.getChangeSupport(ChangeType ct)
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Uses of ChangeSupport in org.biojava.utils |
Methods in org.biojava.utils that return ChangeSupport | |
ChangeSupport |
ChangeForwarder.changeSupport()
Return the underlying ChangeSupport instance that can be used to
fire ChangeEvent s and mannage listeners. |
protected ChangeSupport |
AbstractChangeable.generateChangeSupport()
Called the first time a ChangeSupport object is needed. |
protected ChangeSupport |
AbstractChangeable.getChangeSupport(ChangeType ct)
Called to retrieve the ChangeSupport for this object |
Constructors in org.biojava.utils with parameters of type ChangeSupport | |
ChangeForwarder(java.lang.Object source,
ChangeSupport changeSupport)
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