Uses of Interface
org.biojava.utils.ChangeListener

Packages that use ChangeListener
org.biojava.bio The core classes that will be used throughout the bio packages. 
org.biojava.bio.dist Probability distributions over Alphabets. 
org.biojava.bio.dp HMM and Dynamic Programming Algorithms. 
org.biojava.bio.gui.sequence Graphical displays of biological sequences and associated annotations. 
org.biojava.bio.program.das Development client for the Distributed Annotation System. 
org.biojava.bio.seq Classes and interfaces for defining biological sequences and informatics objects. 
org.biojava.bio.seq.db Collections of biological sequence data. 
org.biojava.bio.seq.db.biosql General purpose Sequence storage in a relational database. 
org.biojava.bio.seq.impl Standard in-memory implementations of Sequence and Feature
org.biojava.bio.seq.projection Code for projecting Feature objects into alternate coordinate systems. 
org.biojava.bio.symbol Representation of the Symbols that make up a sequence, and locations within them. 
org.biojava.utils Miscellaneous utility classes used by other BioJava components. 
 

Uses of ChangeListener in org.biojava.bio
 

Classes in org.biojava.bio that implement ChangeListener
static class Annotatable.AnnotationForwarder
          A helper class so that you don't have to worry about forwarding events from the Annotation object to the Annotatable one.
protected  class MergeAnnotation.PropertyForwarder
           
protected  class OverlayAnnotation.PropertyForwarder
           
 

Uses of ChangeListener in org.biojava.bio.dist
 

Classes in org.biojava.bio.dist that implement ChangeListener
static class Distribution.NullModelForwarder
          This listens to the null model distribution events and converts them into NULL_MODEL events.
 

Uses of ChangeListener in org.biojava.bio.dp
 

Classes in org.biojava.bio.dp that implement ChangeListener
static class MarkovModel.DistributionForwarder
          Add this as a listener to each distribution in a model.
 

Uses of ChangeListener in org.biojava.bio.gui.sequence
 

Classes in org.biojava.bio.gui.sequence that implement ChangeListener
static class PairwiseSequenceRenderer.PairwiseRendererForwarder
          PairwiseRendererForwarder forward events to other renderers.
static class SequenceRenderer.RendererForwarder
           
 

Methods in org.biojava.bio.gui.sequence with parameters of type ChangeListener
 void TranslatedSequencePanel.addChangeListener(ChangeListener cl)
          addChangeListener adds a listener for all types of change.
 void TranslatedSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)
          addChangeListener adds a listener for specific types of change.
 void TranslatedSequencePanel.removeChangeListener(ChangeListener cl)
          removeChangeListener removes a listener.
 void TranslatedSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)
          removeChangeListener removes a listener.
 void SequencePanel.addChangeListener(ChangeListener cl)
           
 void SequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void SequencePanel.removeChangeListener(ChangeListener cl)
           
 void SequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 void PairwiseSequencePanel.addChangeListener(ChangeListener cl)
          addChangeListener adds a listener for all types of change.
 void PairwiseSequencePanel.addChangeListener(ChangeListener cl, ChangeType ct)
          addChangeListener adds a listener for specific types of change.
 void PairwiseSequencePanel.removeChangeListener(ChangeListener cl)
          removeChangeListener removes a listener.
 void PairwiseSequencePanel.removeChangeListener(ChangeListener cl, ChangeType ct)
          removeChangeListener removes a listener.
 void SequencePoster.addChangeListener(ChangeListener cl)
           
 void SequencePoster.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void SequencePoster.removeChangeListener(ChangeListener cl)
           
 void SequencePoster.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 

Uses of ChangeListener in org.biojava.bio.program.das
 

Methods in org.biojava.bio.program.das with parameters of type ChangeListener
 void ReferenceServer.addChangeListener(ChangeListener cl)
           
 void ReferenceServer.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void ReferenceServer.removeChangeListener(ChangeListener cl)
           
 void ReferenceServer.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 

Uses of ChangeListener in org.biojava.bio.seq
 

Methods in org.biojava.bio.seq with parameters of type ChangeListener
 void ProjectedFeatureHolder.addChangeListener(Feature f, ChangeListener cl, ChangeType ct)
           
 void ProjectedFeatureHolder.removeChangeListener(Feature f, ChangeListener cl, ChangeType ct)
           
 void SubSequence.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void SubSequence.addChangeListener(ChangeListener cl)
           
 void SubSequence.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 void SubSequence.removeChangeListener(ChangeListener cl)
           
 

Uses of ChangeListener in org.biojava.bio.seq.db
 

Classes in org.biojava.bio.seq.db that implement ChangeListener
protected  class SequenceDBWrapper.SequencesForwarder
           
 

Uses of ChangeListener in org.biojava.bio.seq.db.biosql
 

Methods in org.biojava.bio.seq.db.biosql with parameters of type ChangeListener
 void BioSQLSequenceDB.addChangeListener(ChangeListener cl)
           
 void BioSQLSequenceDB.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void BioSQLSequenceDB.removeChangeListener(ChangeListener cl)
           
 void BioSQLSequenceDB.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 

Uses of ChangeListener in org.biojava.bio.seq.impl
 

Methods in org.biojava.bio.seq.impl with parameters of type ChangeListener
 void LazyFilterFeatureHolder.addChangeListener(ChangeListener cl)
           
 void LazyFilterFeatureHolder.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void LazyFilterFeatureHolder.removeChangeListener(ChangeListener cl)
           
 void LazyFilterFeatureHolder.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 

Uses of ChangeListener in org.biojava.bio.seq.projection
 

Methods in org.biojava.bio.seq.projection with parameters of type ChangeListener
 void ProjectedFeature.addChangeListener(ChangeListener cl)
           
 void ProjectedFeature.removeChangeListener(ChangeListener cl)
           
 void ProjectedFeature.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void ProjectedFeature.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 void ProjectionContext.addChangeListener(Feature f, ChangeListener cl, ChangeType ct)
          Delegate for addChangeListener
 void ProjectionContext.removeChangeListener(Feature f, ChangeListener cl, ChangeType ct)
          Delegate for removeChangeListener
 

Uses of ChangeListener in org.biojava.bio.symbol
 

Classes in org.biojava.bio.symbol that implement ChangeListener
 class AbstractSymbolList.EditScreener
          This adapter screens all edit events to see if they overlap with a window of interest.
 class AbstractSymbolList.EditTranslater
          This translates edit events that fall within a window into window co-ordinates.
 class SimpleSymbolList
          Basic implementation of SymbolList.
 

Uses of ChangeListener in org.biojava.utils
 

Classes in org.biojava.utils that implement ChangeListener
 class ChangeAdapter
          This is a ChangeListener that ignores everything.
 class ChangeForwarder
          This is a ChangeListener that is designed to adapt events of one type from one source to events of another type emitted by another source.
static class ChangeListener.AlwaysVetoListener
          An implementation that always vetoes everything.
static class ChangeListener.LoggingListener
          A listener that writes information about the event stream to a PrintStream.
 

Fields in org.biojava.utils declared as ChangeListener
static ChangeListener ChangeListener.ALWAYS_VETO
          Convenience implementation which vetoes every change of which it is notified.
static ChangeListener ChangeListener.LOG_TO_OUT
          Convenience implementation that echoes all events to out.
 

Methods in org.biojava.utils with parameters of type ChangeListener
 void ChangeHub.addListener(java.lang.Object key, ChangeListener listener, ChangeType ct)
          add a ChangeListener associated with given key.
 void ChangeHub.removeListener(java.lang.Object key, ChangeListener listener, ChangeType ct)
          remove a ChangeListener associated with given key.
 void ChangeSupport.addChangeListener(ChangeListener cl)
          Add a listener that will be informed of all changes.
 void ChangeSupport.addChangeListener(ChangeListener cl, ChangeType ct)
          Add a listener that will be informed of changes of a given type (and it's subtypes)
 void ChangeSupport.removeChangeListener(ChangeListener cl)
          Remove a listener that was interested in all types of changes.
 void ChangeSupport.removeChangeListener(ChangeListener cl, ChangeType ct)
          Remove a listener that was interested in a specific types of changes.
 void Unchangeable.addChangeListener(ChangeListener cl)
           
 void Unchangeable.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void Unchangeable.removeChangeListener(ChangeListener cl)
           
 void Unchangeable.removeChangeListener(ChangeListener cl, ChangeType ct)
           
 void IndexedChangeHub.addListener(java.lang.Object key, ChangeListener listener, ChangeType ct)
           
 void IndexedChangeHub.removeListener(java.lang.Object key, ChangeListener listener, ChangeType ct)
           
 void Changeable.addChangeListener(ChangeListener cl)
          Add a listener that will be informed of all changes.
 void Changeable.addChangeListener(ChangeListener cl, ChangeType ct)
          Add a listener that will be informed of changes of a given type.
 void Changeable.removeChangeListener(ChangeListener cl)
          Remove a listener that was interested in all types of changes.
 void Changeable.removeChangeListener(ChangeListener cl, ChangeType ct)
          Remove a listener that was interested in a specific types of changes.
 void AbstractChangeable.addChangeListener(ChangeListener cl)
           
 void AbstractChangeable.addChangeListener(ChangeListener cl, ChangeType ct)
           
 void AbstractChangeable.removeChangeListener(ChangeListener cl)
           
 void AbstractChangeable.removeChangeListener(ChangeListener cl, ChangeType ct)