Uses of Interface
org.biojava.bio.gui.sequence.FeatureRenderer

Packages that use FeatureRenderer
org.biojava.bio.gui.sequence Graphical displays of biological sequences and associated annotations. 
 

Uses of FeatureRenderer in org.biojava.bio.gui.sequence
 

Subinterfaces of FeatureRenderer in org.biojava.bio.gui.sequence
 interface BeadFeatureRenderer
          BeadFeatureRenderers use a 'string of beads' metaphor for displaying features.
 interface ImageMapRenderer
          ImageMapRenderers create strings representing Features suitable for use in HTML image maps.
 

Classes in org.biojava.bio.gui.sequence that implement FeatureRenderer
 class AbstractBeadRenderer
          AbstractBeadRenderer is a an abstract base class for the creation of FeatureRenderers which use a 'string of beads' metaphor for displaying features.
 class BasicFeatureRenderer
           
 class EllipticalBeadRenderer
          EllipticalBeadRenderer renders features as simple ellipses.
 class FeatureLabelRenderer
           
 class RectangularBeadRenderer
          RectangularBeadRenderer renders features as simple rectangles.
 class RectangularImapRenderer
          RectangularImapRenderer is a decorator for RectangularBeadRenderer which adds the ability to create HTML image map coordinates which correspond to the feature rendering produced by the RectangularBeadRenderer.
 class RoundRectangularBeadRenderer
          RoundRectangularBeadRenderer renders features as rectangles with rounded corners.
 class SixFrameZiggyRenderer
          A feature renderer that computes the data necessary to render multi-exon transcripts without CDS data.
 class StackedFeatureRenderer
          Allows you to stack multiple feature renderers up (for example a label renderer and a beaded renderer) and have them treated as a single renderer for layout.
 class TickFeatureRenderer
           
 class ZiggyFeatureRenderer
          A feature renderer that draws non-contiguous features as a set of boxes joined by zig-zags.
 class ZiggyImapRenderer
          ZiggyImapRenderer is a decorator for ZiggyFeatureRenderer which adds the ability to create HTML image map coordinates which correspond to the feature rendering produced by the ZiggyFeatureRenderer.
 

Methods in org.biojava.bio.gui.sequence that return FeatureRenderer
 FeatureRenderer FeatureBlockSequenceRenderer.getFeatureRenderer()
          getFeatureRenderer returns the currently active renderer.
 

Methods in org.biojava.bio.gui.sequence with parameters of type FeatureRenderer
 void StackedFeatureRenderer.addRenderer(FeatureRenderer renderer)
           
 void StackedFeatureRenderer.removeRenderer(FeatureRenderer renderer)
           
 void FeatureBlockSequenceRenderer.setFeatureRenderer(FeatureRenderer renderer)
          setFeatureRenderer sets the renderer to be used.
 

Constructors in org.biojava.bio.gui.sequence with parameters of type FeatureRenderer
FeatureBlockSequenceRenderer(FeatureRenderer fRend)
          Creates a new FeatureBlockSequenceRenderer which uses the specified FeatureRenderer.