Uses of Class
org.biojava.bio.dp.twohead.EmissionCache

Packages that use EmissionCache
org.biojava.bio.dp.twohead   
 

Uses of EmissionCache in org.biojava.bio.dp.twohead
 

Fields in org.biojava.bio.dp.twohead declared as EmissionCache
protected  EmissionCache LightPairDPCursor.eCache
          Description of the Field
protected  EmissionCache AbstractMatrixPairDPCursor.eCache
           
 

Constructors in org.biojava.bio.dp.twohead with parameters of type EmissionCache
LightPairDPCursor(SymbolList seq1, SymbolList seq2, int depth1, int depth2, int numStates, EmissionCache eCache)
          Constructor for the LightPairDPCursor object
MatrixPairDPCursor(SymbolList seq1, SymbolList seq2, int depth1, int depth2, PairDPMatrix matrix, EmissionCache eCache)
           
AbstractMatrixPairDPCursor(SymbolList seq1, SymbolList seq2, int start1, int start2, int depth1, int depth2, PairDPMatrix matrix, EmissionCache eCache)
           
BackMatrixPairDPCursor(SymbolList seq1, SymbolList seq2, int depth1, int depth2, PairDPMatrix matrix, EmissionCache eCache)